neurodiginerationcell-biology research briefs
Built with Claude Code

A research-grade gene brief, composed live from four public bio APIs.

Type a human gene symbol. neurodigineration queries UniProt, NCBI E-utilities, Ensembl REST, and Reactome in parallel and renders a structured brief — protein function, gene metadata, pathway membership, and the most recent literature — in the time it takes you to read this sentence.

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Sources: UniProt · NCBI E-utilities · Ensembl REST · Reactome ContentService

How this works

neurodigineration-web is the browser-native sibling of neurodigineration, a TypeScript CLI that wraps the same four public bioinformatics APIs in a Model Context Protocol (MCP) server for Claude Code. The web app does no caching, no server-side aggregation, and no LLM inference at request time — every section you see is composed live from the same primary sources a working bench scientist would cite.

UniProt

Reviewed (Swiss-Prot) entry for the protein: function, length, accession.

NCBI E-utilities

Gene record from Entrez Gene plus the five most recent PubMed citations.

Ensembl REST

Canonical Ensembl gene metadata: biotype, assembly, chromosome, strand.

Reactome

Curated human pathway membership, mapped from the UniProt accession.

Built with Claude Code on top of the neurodigineration design. The full agent version exposes seven tools across these same APIs via MCP, with custom slash commands, scoped sub-agents, pre/post tool-use hooks, and a Claude Agent SDK headless build for batch runs.